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Allan Jones

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Allan Jones is President-Emeritus and founding CEO of the Allen Institute. Jones was one of the Allen Institute’s first four employees when the nonprofit launched in 2003, originally as the Allen Institute for Brain Science, and took the helm within the first few years to manage its growth and impact, eventually leading the launch of the Institute’s other four scientific divisions. Along with the Allen Institute’s founder, the late philanthropist Paul G. Allen, Jones pioneered a unique approach to neuroscience, and later to other areas of bioscience, through the Institute’s core principles of big science, team science and open science. Jones has continued to champion the need for open data sharing and the broader importance of open science. After 18 years with the organization, Jones stepped down as President and CEO in January 2022.

Jones’ publications have garnered approximately 1,000 highly influential citations on Semantic Scholar. His 2011 TED Talk: “A map of the brain” has been viewed nearly 1.25 million times. He has advised and helped organize many current U.S. and global neuroscience initiatives, including the National Institutes of Health’s BRAIN Initiative, the Human Brain Project and the International Brain Initiative. Jones currently serves on several advisory boards and the Fred Hutchinson Cancer Research Center Board of Trustees, and he is the former Chair of the World Economic Forum’s Global Agenda Council on Neuroscience and Behavior.

Originally from Wichita, Kansas, Jones received a B.S. in biology from Duke University and a Ph.D. in genetics and developmental biology from Washington University School of Medicine. After a brief period as a post doc at the University of Pennsylvania, Jones joined Avitech Diagnostics, a small start-up company in Philadelphia. He moved to Seattle to work for Rosetta Inpharmatics, which was later acquired by Merck and Co.

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Allen Institute President and Chief Executive Officer, Allan Jones, Ph.D., announces plan to step down in 2021
Today the Allen Institute’s founding CEO, Allan Jones, Ph.D., announced he will step down after nearly 18 years with the organization.
news
Reflections on the beginnings of the Allen Institute
The Allen Institute houses some impressive statistics behind its glassy facade: more than 2.7 million high-resolution science images and nearly 1,400 hours of movies of brain activity shared with the global scientific community.

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featured publications

publication / 2018
Paul G. Allen (1953–2018)
Science
publication / 2018
An anatomic transcriptional atlas of human glioblastoma
Science (New York, N.Y.)
publication / 2016
Big Science, Team Science, and Open Science for Neuroscience
Neuron
publication / 2015
Canonical genetic signatures of the adult human brain
Nature Neuroscience
publication / 2011
Multi-scale correlation structure of gene expression in the brain
Neural Networks: The Official Journal of the International Neural Network Society
publication / 2009
A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale
PLoS computational biology
publication / 2008
Exploration and visualization of gene expression with neuroanatomy in the adult mouse brain
BMC bioinformatics
publication / 2008
Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data
Genome Biology
publication / 2007
Neuroinformatics for genome-wide 3D gene expression mapping in the mouse brain
IEEE/ACM transactions on computational biology and bioinformatics
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